{
  "_id": "6ac8ecd7de46216d5edd9372",
  "Package": "BMIselect",
  "Title": "Bayesian MI-LASSO for Variable Selection on Multiply-Imputed\nDatasets",
  "Version": "1.0.10",
  "Authors@R": "c(person(\"Jungang\", \"Zou\", email = \"jungang.zou@gmail.com\", role = c(\"aut\", \"cre\")),\nperson(given = \"Sijian\",\nfamily = \"Wang\",\nrole = c(\"aut\")\n),\nperson(given = \"Qixuan\",\nfamily = \"Chen\",\nrole = c(\"aut\")\n))",
  "Maintainer": "Jungang Zou <jungang.zou@gmail.com>",
  "Description": "Provides a suite of Bayesian MI-LASSO for variable\nselection methods for multiply-imputed datasets. The package\nincludes four Bayesian MI-LASSO models using shrinkage\n(Multi-Laplace, Horseshoe, ARD) and Spike-and-Slab\n(Spike-and-Laplace) priors, along with tools for model fitting\nvia MCMC, four-step projection predictive variable selection,\nand hyperparameter calibration. Methods are suitable for both\ncontinuous and binary covariates under missing-at-random or\nmissing-completely-at-random assumptions. See Zou, J., Wang, S.\nand Chen, Q. (2025), Bayesian MI-LASSO for Variable Selection\non Multiply-Imputed Data. ArXiv, 2211.00114.\n<doi:10.48550/arXiv.2211.00114> for more details. We also\nprovide the frequentist MI-LASSO function.",
  "License": "Apache License (>= 2)",
  "Encoding": "UTF-8",
  "Roxygen": "list(markdown = TRUE)",
  "RoxygenNote": "7.3.3",
  "VignetteBuilder": "knitr",
  "Config/pak/sysreqs": "cmake make libicu-dev libx11-dev zlib1g-dev",
  "Repository": "https://zjg540066169.r-universe.dev",
  "Date/Publication": "2026-10-07 05:24:41 UTC",
  "RemoteUrl": "https://github.com/zjg540066169/bmiselect",
  "RemoteRef": "HEAD",
  "RemoteSha": "31c9950d21b2dc77de99828153ad6285b7c46fd2",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-10-09 13:25:16 UTC",
    "User": "root"
  },
  "Author": "Jungang Zou [aut, cre],\nSijian Wang [aut],\nQixuan Chen [aut]",
  "_user": "zjg540066169",
  "_type": "src",
  "_file": "BMIselect_1.0.10.tar.gz",
  "_fileid": "https://r2.ropensci.org/15805b1782a81c0db3285dd756d0eb89ddcb01fd80b2fbe1a9108bfa6bb205ff",
  "_filesize": 217884,
  "_sha256": "15805b1782a81c0db3285dd756d0eb89ddcb01fd80b2fbe1a9108bfa6bb205ff",
  "_expires": "2027-01-17T13:32:05.000Z",
  "_created": "2026-10-09T13:25:16.000Z",
  "_published": "2026-10-09T13:32:07.517Z",
  "_buildurl": "https://github.com/r-universe/zjg540066169/actions/runs/37936152152",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_jobs": [
    {
      "job": 113840819862,
      "time": 147,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "11618543459"
    },
    {
      "job": 113840819972,
      "time": 180,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "11618359546"
    },
    {
      "job": 113840819838,
      "time": 153,
      "config": "linux-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11618832609"
    },
    {
      "job": 113840819889,
      "time": 223,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11618283899"
    },
    {
      "job": 113840820100,
      "time": 127,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "11618539178"
    },
    {
      "job": 113840819897,
      "time": 339,
      "config": "macos-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "11617864453"
    },
    {
      "job": 113840819922,
      "time": 141,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11617959181"
    },
    {
      "job": 113840820009,
      "time": 288,
      "config": "macos-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11618936163"
    },
    {
      "job": 113838721454,
      "time": 316,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11617984255"
    },
    {
      "job": 113840819815,
      "time": 137,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "11618584258"
    },
    {
      "job": 113840820156,
      "time": 230,
      "config": "windows-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "11618209388"
    },
    {
      "job": 113840819950,
      "time": 186,
      "config": "windows-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "11618837701"
    },
    {
      "job": 113840820035,
      "time": 137,
      "config": "windows-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "11617954659"
    },
    {
      "job": 113840819978,
      "time": 276,
      "config": "windows-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11618603712"
    },
    {
      "job": 113840820119,
      "time": 164,
      "config": "windows-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11619015562"
    }
  ],
  "_upstream": "https://github.com/zjg540066169/bmiselect",
  "_commit": {
    "id": "31c9950d21b2dc77de99828153ad6285b7c46fd2",
    "author": "zjg540066169 <jungang.zou@gmail.com>",
    "committer": "zjg540066169 <jungang.zou@gmail.com>",
    "message": "Keep BIC named as the default selection criterion in the docs\n\nThe modified BIC is the method the package is built around and the default for\ncriterion, so the title and the description of best_select name it, as they did\nin 1.0.9.\n\nCo-Authored-By: Claude Opus 5 <noreply@anthropic.com>\n",
    "time": 1791350681
  },
  "_maintainer": {
    "name": "Jungang Zou",
    "email": "jungang.zou@gmail.com",
    "login": "zjg540066169",
    "description": "I am a Ph.D. student of Biostatistics at Columbia University. My research focuses on Bayesian statistics and missing data.",
    "uuid": 18543895
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.5.0",
      "role": "Depends"
    },
    {
      "package": "Rcpp",
      "role": "LinkingTo"
    },
    {
      "package": "RcppArmadillo",
      "role": "LinkingTo"
    },
    {
      "package": "Rcpp",
      "role": "Imports"
    },
    {
      "package": "MASS",
      "role": "Imports"
    },
    {
      "package": "Rfast",
      "role": "Imports"
    },
    {
      "package": "foreach",
      "role": "Imports"
    },
    {
      "package": "doParallel",
      "role": "Imports"
    },
    {
      "package": "parallel",
      "role": "Imports"
    },
    {
      "package": "arm",
      "role": "Imports"
    },
    {
      "package": "mice",
      "role": "Imports"
    },
    {
      "package": "abind",
      "role": "Imports"
    },
    {
      "package": "stringr",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "posterior",
      "role": "Imports"
    },
    {
      "package": "loo",
      "role": "Imports"
    },
    {
      "package": "testthat",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    }
  ],
  "_owner": "zjg540066169",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2026-28",
      "n": 4
    },
    {
      "week": "2026-34",
      "n": 1
    },
    {
      "week": "2026-41",
      "n": 5
    }
  ],
  "_tags": [],
  "_topics": [
    "bayesian-statistics",
    "missing-data",
    "multiple-imputation",
    "variable-selection",
    "openblas",
    "cpp",
    "openmp"
  ],
  "_stars": 4,
  "_contributors": [
    {
      "user": "zjg540066169",
      "count": 78,
      "uuid": 18543895
    }
  ],
  "_userbio": {
    "uuid": 18543895,
    "type": "user",
    "name": "Jungang Zou",
    "followers": 6,
    "description": "I am a Ph.D. student of Biostatistics at Columbia University. My research focuses on Bayesian statistics and missing data."
  },
  "_downloads": {
    "count": 399,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/BMIselect"
  },
  "_devurl": "https://github.com/zjg540066169/bmiselect",
  "_searchresults": 3,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/BMIselect.html",
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/manual.pdf",
    "extra/readme.html",
    "extra/readme.md"
  ],
  "_homeurl": "https://github.com/zjg540066169/bmiselect",
  "_realowner": "zjg540066169",
  "_cranurl": true,
  "_releases": [
    {
      "version": "1.0.1",
      "date": "2025-07-09"
    },
    {
      "version": "1.0.2",
      "date": "2025-08-20"
    },
    {
      "version": "1.0.3",
      "date": "2025-08-25"
    },
    {
      "version": "1.0.4",
      "date": "2026-07-09"
    },
    {
      "version": "1.0.9",
      "date": "2026-08-21"
    },
    {
      "version": "1.0.10",
      "date": "2026-10-07"
    }
  ],
  "_exports": [
    "BMI_LASSO",
    "MI_LASSO",
    "sim_A",
    "sim_B",
    "sim_C"
  ],
  "_help": [
    {
      "page": "BMI_LASSO",
      "title": "Bayesian MI-LASSO for Multiply-Imputed Regression",
      "topics": [
        "BMI_LASSO"
      ]
    },
    {
      "page": "MI_LASSO",
      "title": "Multiple-Imputation LASSO (MI-LASSO)",
      "topics": [
        "MI_LASSO"
      ]
    },
    {
      "page": "sim_A",
      "title": "Simulate dataset A: Independent continuous covariates with MCAR/MAR missingness",
      "topics": [
        "sim_A"
      ]
    },
    {
      "page": "sim_B",
      "title": "Simulate dataset B: AR(1)-correlated continuous covariates with MCAR/MAR missingness",
      "topics": [
        "sim_B"
      ]
    },
    {
      "page": "sim_C",
      "title": "Simulate dataset C: AR(1)-latent Gaussian dichotomized to binary covariates with MCAR/MAR missingness",
      "topics": [
        "sim_C"
      ]
    }
  ],
  "_readme": "https://github.com/zjg540066169/bmiselect/raw/HEAD/README.md",
  "_rundeps": [
    "abind",
    "arm",
    "backports",
    "bit",
    "bit64",
    "boot",
    "broom",
    "checkmate",
    "cli",
    "clipr",
    "coda",
    "codetools",
    "cpp11",
    "crayon",
    "distributional",
    "doParallel",
    "dplyr",
    "forcats",
    "foreach",
    "generics",
    "glmnet",
    "glue",
    "haven",
    "hms",
    "iterators",
    "jomo",
    "lattice",
    "lifecycle",
    "lme4",
    "loo",
    "magrittr",
    "MASS",
    "Matrix",
    "matrixStats",
    "mice",
    "minqa",
    "mitml",
    "nlme",
    "nloptr",
    "nnet",
    "numDeriv",
    "ordinal",
    "pan",
    "pillar",
    "pkgconfig",
    "posterior",
    "prettyunits",
    "progress",
    "purrr",
    "R6",
    "rbibutils",
    "Rcpp",
    "RcppArmadillo",
    "RcppEigen",
    "RcppParallel",
    "Rdpack",
    "readr",
    "reformulas",
    "Rfast",
    "rlang",
    "rpart",
    "shape",
    "stringi",
    "stringr",
    "survival",
    "tensorA",
    "tibble",
    "tidyr",
    "tidyselect",
    "tzdb",
    "ucminf",
    "utf8",
    "vctrs",
    "vroom",
    "withr",
    "zigg"
  ],
  "_sysdeps": [
    {
      "shlib": "liblapack",
      "package": "libopenblas0-pthread",
      "source": "openblas",
      "version": "0.3.32+ds-5",
      "name": "openblas",
      "homepage": "https://www.openblas.net/",
      "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)"
    },
    {
      "shlib": "libblas",
      "package": "libopenblas0-pthread",
      "source": "openblas",
      "version": "0.3.32+ds-5",
      "name": "openblas",
      "homepage": "https://www.openblas.net/",
      "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)"
    },
    {
      "shlib": "libstdc++",
      "package": "libstdc++6",
      "source": "gcc",
      "version": "16-20260322-1ubuntu1",
      "name": "c++",
      "homepage": "http://gcc.gnu.org/",
      "description": "GNU Standard C++ Library v3"
    },
    {
      "shlib": "libgomp",
      "package": "libgomp1",
      "source": "gcc",
      "version": "16-20260322-1ubuntu1",
      "name": "openmp",
      "homepage": "http://gcc.gnu.org/",
      "description": "GCC OpenMP (GOMP) support library"
    }
  ],
  "_vignettes": [
    {
      "source": "Introduction.Rmd",
      "filename": "Introduction.html",
      "title": "An Introduction to BMIselect",
      "author": "Jungang Zou",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Limitations",
        "Data Preparation",
        "Variable Selection Using Bayesian MI-LASSO",
        "Example of Horseshoe model",
        "Hyperparameters Specification",
        "Parallel Computing for Multiple Chains",
        "Frequentists MI-LASSO",
        "Disclaimer"
      ],
      "created": "2026-07-09 02:16:24",
      "modified": "2026-10-07 03:41:58",
      "commits": 3
    }
  ],
  "_score": 4.778151250383644,
  "_indexed": true,
  "_nocasepkg": "bmiselect",
  "_universes": [
    "zjg540066169"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.0.10",
      "date": "2026-10-09T13:27:43.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "31c9950d21b2dc77de99828153ad6285b7c46fd2",
      "fileid": "https://r2.ropensci.org/3a4ff347875ab0d74c8abe271b5007b7343ff027643fec1eea0162dad50bd20b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zjg540066169/actions/runs/37936152152"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.0.10",
      "date": "2026-10-09T13:28:06.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "31c9950d21b2dc77de99828153ad6285b7c46fd2",
      "fileid": "https://r2.ropensci.org/bc9a663a43c0f4babbbec378b636af947a4c8b3a6bafba7e59afc9033c71d79b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zjg540066169/actions/runs/37936152152"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "1.0.10",
      "date": "2026-10-09T13:27:50.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "31c9950d21b2dc77de99828153ad6285b7c46fd2",
      "fileid": "https://r2.ropensci.org/294f554826969c158688259728da6e76e71c515beaade9ec37f4f1f235fffafb",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zjg540066169/actions/runs/37936152152"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "1.0.10",
      "date": "2026-10-09T13:28:49.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "31c9950d21b2dc77de99828153ad6285b7c46fd2",
      "fileid": "https://r2.ropensci.org/7530ebc1f6434ccec13aa89bc2310d0c55bc3218fa18aab88e6bfc1384d2db2e",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zjg540066169/actions/runs/37936152152"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.0.10",
      "date": "2026-10-09T13:27:30.000Z",
      "arch": "aarch64",
      "commit": "31c9950d21b2dc77de99828153ad6285b7c46fd2",
      "fileid": "https://r2.ropensci.org/d73d48bf00f187a5c9ffff1e28dc32a850039d8b8f890a8b4211057223a31c61",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zjg540066169/actions/runs/37936152152"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.0.10",
      "date": "2026-10-09T13:29:46.000Z",
      "arch": "x86_64",
      "commit": "31c9950d21b2dc77de99828153ad6285b7c46fd2",
      "fileid": "https://r2.ropensci.org/9468c7a451652bb3acddea27bc2f932fd0cb36c0c2152e0988ed574dbbaf6bf0",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zjg540066169/actions/runs/37936152152"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "1.0.10",
      "date": "2026-10-09T13:27:36.000Z",
      "arch": "aarch64",
      "commit": "31c9950d21b2dc77de99828153ad6285b7c46fd2",
      "fileid": "https://r2.ropensci.org/8b4ab65ee4c8dd9f13784f71a44b4d385c4ba6efab39a564b6905077e7f06f1e",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zjg540066169/actions/runs/37936152152"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "1.0.10",
      "date": "2026-10-09T13:29:21.000Z",
      "arch": "x86_64",
      "commit": "31c9950d21b2dc77de99828153ad6285b7c46fd2",
      "fileid": "https://r2.ropensci.org/067eb04f0bf8bba3daf2d2855c48d9b015333a5adab06b413790fde5ccc6bd8f",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zjg540066169/actions/runs/37936152152"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.0.10",
      "date": "2026-10-09T13:27:58.000Z",
      "arch": "emscripten",
      "commit": "31c9950d21b2dc77de99828153ad6285b7c46fd2",
      "fileid": "https://r2.ropensci.org/2facb46a1272e24d0fa0bf8c80e94a4be4e068acf82e2870282877acbdbf891b",
      "status": "success",
      "buildurl": "https://github.com/r-universe/zjg540066169/actions/runs/37936152152"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.0.10",
      "date": "2026-10-09T13:28:47.000Z",
      "arch": "aarch64",
      "commit": "31c9950d21b2dc77de99828153ad6285b7c46fd2",
      "fileid": "https://r2.ropensci.org/1c92c3f784dd5d810fa997dbe978af1e675ff1325982edc24f235992be8d30a4",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zjg540066169/actions/runs/37936152152"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.0.10",
      "date": "2026-10-09T13:27:31.000Z",
      "arch": "x86_64",
      "commit": "31c9950d21b2dc77de99828153ad6285b7c46fd2",
      "fileid": "https://r2.ropensci.org/bfc857f4adbc7468bba9547176e6580f357cd16edff07b05de6e112aee2b8ee9",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zjg540066169/actions/runs/37936152152"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.0.10",
      "date": "2026-10-09T13:27:21.000Z",
      "arch": "x86_64",
      "commit": "31c9950d21b2dc77de99828153ad6285b7c46fd2",
      "fileid": "https://r2.ropensci.org/f610fa85f96e72e206d3a995851c0b2ba0facf3282c0002768200a511b5019e0",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zjg540066169/actions/runs/37936152152"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "1.0.10",
      "date": "2026-10-09T13:29:35.000Z",
      "arch": "aarch64",
      "commit": "31c9950d21b2dc77de99828153ad6285b7c46fd2",
      "fileid": "https://r2.ropensci.org/770820c00c3a0fc035121a36cfa9888df8360ee4216bec1a1329be0c2c272731",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zjg540066169/actions/runs/37936152152"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "1.0.10",
      "date": "2026-10-09T13:27:24.000Z",
      "arch": "x86_64",
      "commit": "31c9950d21b2dc77de99828153ad6285b7c46fd2",
      "fileid": "https://r2.ropensci.org/ed0e15745424edd9ab099b9e9cfe7d1dd20275b96852091971176d6b9ef03965",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zjg540066169/actions/runs/37936152152"
    }
  ]
}