Package: PSPI 1.4
PSPI: Propensity Score Predictive Inference for Generalizability and Transportability
Provides a suite of Propensity Score Predictive Inference (PSPI) methods to generalize treatment effects in trials to target populations. The package includes an existing model Bayesian Causal Forest (BCF) and four PSPI models (BCF-PS, FullBART, SplineBART, DSplineBART). These methods leverage Bayesian Additive Regression Trees (BART) to adjust for high-dimensional covariates and nonlinear associations, while SplineBART and DSplineBART further use propensity score based splines to address covariate shift between trial data and target population.
Authors:
PSPI_1.4.tar.gz
PSPI_1.4.zip(r-4.7-x86_64)PSPI_1.4.zip(r-4.7-arm64)PSPI_1.4.zip(r-4.6-x86_64)PSPI_1.4.zip(r-4.6-arm64)PSPI_1.4.zip(r-4.5-x86_64)
PSPI_1.4.tgz(r-4.6-x86_64)PSPI_1.4.tgz(r-4.6-arm64)PSPI_1.4.tgz(r-4.5-x86_64)PSPI_1.4.tgz(r-4.5-arm64)
PSPI_1.4.tar.gz(r-4.7-arm64)PSPI_1.4.tar.gz(r-4.7-x86_64)PSPI_1.4.tar.gz(r-4.6-arm64)PSPI_1.4.tar.gz(r-4.6-x86_64)
PSPI_1.4.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
PSPI/json (API)
| # Install 'PSPI' in R: |
| install.packages('PSPI', repos = c('https://zjg540066169.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/zjg540066169/pspi/issues
Last updated from:a9f64f9ac4. Checks:15 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-arm64 | OK | 175 | ||
| linux-devel-x86_64 | OK | 277 | ||
| source / vignettes | OK | 260 | ||
| linux-release-arm64 | OK | 181 | ||
| linux-release-x86_64 | OK | 200 | ||
| macos-release-arm64 | OK | 243 | ||
| macos-release-x86_64 | OK | 251 | ||
| macos-oldrel-arm64 | OK | 211 | ||
| macos-oldrel-x86_64 | OK | 266 | ||
| windows-devel-arm64 | OK | 379 | ||
| windows-devel-x86_64 | OK | 205 | ||
| windows-release-arm64 | OK | 405 | ||
| windows-release-x86_64 | OK | 228 | ||
| windows-oldrel-x86_64 | OK | 155 | ||
| wasm-release | OK | 140 |
Exports:in_trialinvgumbelPSPI_fitPSPI_generalizabilityPSPI_predictsim_generalizabilitysim_trans
Dependencies:abindarmbootclicodadplyrgenericsgluelatticelifecyclelme4magrittrMASSMatrixminqamvtnormnlmenloptrnnetpgpillarpkgconfigR6rbibutilsRcppRcppArmadilloRcppDistRcppEigenRcppProgressRdpackreformulasrlangstringistringrtibbletidyselectutf8vctrswithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Propensity Score Predictive Inference for Generalizability and Transportability | PSPI-package PSPI |
| Identify which population rows are included in a trial subset | in_trial |
| Gumbel quantile transform | invgumbel |
| Fit a PSPI Model (Without Population Data) | PSPI_fit |
| Propensity Scores Predictive Inference for Generalizability and Transportability | PSPI_generalizability |
| Predict from a Fitted PSPI Model on Population Data | PSPI_predict |
| Simulate a superpopulation and a randomized trial under PSPI generalizability scenarios | sim_generalizability |
| Simulate a superpopulation, a randomized trial, and a target sample under PSPI transportability scenarios | sim_trans |
| Summarize a fitted PSPI object | summary.PSPI_generalizability summary.PSPI_predict |
