Package: PSPI 1.2

PSPI: Propensity Score Predictive Inference for Generalizability

Provides a suite of Propensity Score Predictive Inference (PSPI) methods to generalize treatment effects in trials to target populations. The package includes an existing model Bayesian Causal Forest (BCF) and four PSPI models (BCF-PS, FullBART, SplineBART, DSplineBART). These methods leverage Bayesian Additive Regression Trees (BART) to adjust for high-dimensional covariates and nonlinear associations, while SplineBART and DSplineBART further use propensity score based splines to address covariate shift between trial data and target population.

Authors:Jungang Zou [aut, cre], Qixuan Chen [aut], Joseph Schwartz [aut], Nathalie Moise [aut], Roderick Little [aut], Robert McCulloch [ctb], Rodney Sparapani [ctb], Charles Spanbauer [ctb], Robert Gramacy [ctb], Jean-Sebastien Roy [ctb]

PSPI_1.2.tar.gz
PSPI_1.2.zip(r-4.7)PSPI_1.2.zip(r-4.6)PSPI_1.2.zip(r-4.5)
PSPI_1.2.tgz(r-4.6-x86_64)PSPI_1.2.tgz(r-4.6-arm64)PSPI_1.2.tgz(r-4.5-x86_64)PSPI_1.2.tgz(r-4.5-arm64)
PSPI_1.2.tar.gz(r-4.7-arm64)PSPI_1.2.tar.gz(r-4.7-x86_64)PSPI_1.2.tar.gz(r-4.6-arm64)PSPI_1.2.tar.gz(r-4.6-x86_64)
manual.pdf |manual.html
card.svg |card.png
PSPI/json (API)
NEWS

# Install 'PSPI' in R:
install.packages('PSPI', repos = c('https://zjg540066169.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/zjg540066169/pspi/issues

Uses libs:
  • openblas– Optimized BLAS
  • c++– GNU Standard C++ Library v3

On CRAN:

Conda:

openblascpp

3.40 score 1 stars 1 scripts 151 downloads 2 exports 39 dependencies

Last updated from:39bac0d7fc. Checks:12 OK, 1 FAIL. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64OK172
linux-devel-x86_64OK154
source / vignettesOK209
linux-release-arm64OK164
linux-release-x86_64OK181
macos-release-arm64OK166
macos-release-x86_64OK314
macos-oldrel-arm64OK276
macos-oldrel-x86_64OK549
windows-develOK157
windows-releaseOK139
windows-oldrelOK183
wasm-releaseFAIL118

Exports:PSPI_generalizabilitysim_data

Dependencies:abindarmbootclicodadplyrgenericsgluelatticelifecyclelme4magrittrMASSMatrixminqamvtnormnlmenloptrnnetpgpillarpkgconfigR6rbibutilsRcppRcppArmadilloRcppDistRcppEigenRcppProgressRdpackreformulasrlangstringistringrtibbletidyselectutf8vctrswithr